PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004507453.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 363aa    MW: 40983.9 Da    PI: 6.3783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004507453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.7e-10169216455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_004507453.1 169 SHSLAERVRREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 216
                     8**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.01E-16163234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.50E-9163220No hitNo description
Gene3DG3DSA:4.10.280.102.6E-17165232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.364165215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-7169216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-9171221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MLHCLNTSAN LGGGATVSDM TVLERQRARR KWQHEHEHEH EQEQDYHGYF CGNGFSSSHQ  60
IMMVNGCDSA LDEVVVNTKK RKAMNSKVVV VAEESDDDNK DKRIKVSAEE EDESKITEQT  120
KGHKTTKFNK NNRENSAQTS KENSKVSENQ NQKLDYIHVR ARRGQATDSH SLAERVRREK  180
ISERMKYLQD LVPGCNKIAG KAGMLDEIIN YVQSLQRQVE FLSMKLAAVN PRLDFNIDEL  240
FAKEVFPQNF PSIGMQSDMA NPSYLNFNSS QQLVSSLSYC GGIINNIGLM PPDIDIRRNI  300
NAPASLPEMF VDSSCFTHIL PSSTLEGDFQ NLHNVIFDQG RSTSFPSQPF TGLIEASNLK  360
MEM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004507453.10.0PREDICTED: transcription factor bHLH63
TrEMBLG7JHB91e-171G7JHB9_MEDTR; Transcription factor
STRINGGLYMA11G12450.31e-154(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-60cryptochrome-interacting basic-helix-loop-helix 1